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Showing 12 results for Kia
Bafrin Molaei, Mohammad Moghaddam, Seyed Siamak Alvaikia, Ali Bandeh-Hagh,
Volume 3, Issue 2 (3-2017)
Abstract
This experiment was conducted during 2013-2014 in Tabriz University research farm, Iran. In this research, the inheritance of some agronomic and physiological traits in different generations of Bam (tolerant to drought) and Artha (sensitive to drought) cross was studied in field conditions by generation mean analysis. The experiment was a split plot design using randomized complete blocks with two replications with the irrigation conditions in the main plots and generations in the sub-plots. The interaction between generations and irrigation conditions was significant only for grain yield. Based on the result of generation means analysis for the spike length and straw weight, the threeparameter model was found fitting the analysis. For the thousand-seed weight in the water stress condition and for the plant weight in the irrigation condition, a non-significant chi-square suggesting that the six-parameter model for these traits is suitable. For the other traits, the chi-square was significant in both conditions. For spike length and leaf area, the degree of dominance was greater than one (2.3 and 1.53, respectively) which showed the existence of over-dominance gene action in controlling these traits. Straw weight in normal condition, leaf area and thousand seed weight in the stress condition had a high broad-sense heritability. The narrow-sense heritability for all other traits was low, suggesting the need for exploiting dominance gene action in the breeding programs if hybrid varieties are produced in the bread wheat.
Saeed Bagherikia, Mohammadhadi Pahlevani, Ahad Yamchi, Khalil Zenalinezhad, Ali Mostafaie,
Volume 4, Issue 1 (9-2017)
Abstract
Under drought stress conditions, as one of the most important limiting factors of grain yield in wheat at arid and semi-arid regions, the remobilization of assimilates gain would be more valuable to grain filling. There are a few reports on the importance of remobilization of the root during the grain filling period under drought stress conditions. An advanced mutant line of bread wheat (T-65-7-1) along with its wild type (cv. Tabasi), were planted at two moisture conditions (normal and 30-40% of field capacity) as a factorial experiment based on a completely randomized design with three replications. Sampling for gene expression analysis was conducted from the root in two stages (7 and 21 days after anthesis). In these genotypes, fructan remobilization, efficiency of fructan remobilization, and relative expression of genes involved in the synthesis and hydrolysis of fructan during the grain filling period, in root, were studied under terminal drought stress. The results showed that the stored fructan in the root participated in the assimilate remobilization. Higher fructan remobilization through root to grain in mutant line under drought stress conditions was due to over-expression of genes involved in the synthesis of fructan (1-SST and 6-SFT) at 7-days after anthesis and in hydrolysis of fructan (6-FEH) at 21-days after anthesis, compared to wild type. Drought stress did not cause a significant change in gene expression of 1-FFT and 1-FEH genes in the root of both genotypes, which confirms the only β (2,6) linkages as predominant form of fructan has affected under drought stress conditions. In wheat breeding programs, 1-SST, 6-SFT and 6-FEH can be used as molecular markers for selecting genotypes with high fructan content and more remobilization.
Fatemeh Darvishnia, Mohammadhadi Pahlevani, Khalil Zaynali Nezhad, Khosro Azizi, Saied Bagherikia,
Volume 7, Issue 1 (9-2020)
Abstract
In order to determine the most effective indices for quantifying drought tolerance and identify genotypes that are tolerant to water stress in bread wheat, 50 bread wheat genotypes were compared in a randomized complete block design with three replications under both the non-stress dry farming with two complementary irrigation and the water stress dry farming conditions in Khorramabad, Iran. Analysis of variance showed that there was a significant difference among the genotypes in terms of all of the traits except the number of spike per area. In this study, eight indices including: Stress Tolerance Index (STI), Geometric Mean Productivity (GMP), Mean Productivity (MP), Yield Index (YI), Harmonic Mean (HM), Yield Stability Index (YSI), Stress Susceptibility Index (SSI), and Tolerance index (TOL) were calculated by using of seed yield of the genotypes under both conditions. Indices that selection based on them will improve the yield in both conditions, are considered as suitable index. STI, GMP, MP and HM were introduced as suitable index for drought resistance selection. Genotypes Shiroodi and S-90-5 were determined as the most appropriate based on 3D plot. Based on positive correlation between water stress resistance indices and yield under stress and non-stress environments, STI and GMP were the best indices. By using the Biplot method, Shiroodi, S-90-5 and Oroum genotypes were considered as high yielding potential genotypes under the both conditions. According to the results of cluster analysis, genotypes were classified into three groups based on drought tolerance indices. Graphical analysis of genotypes also showed that genotypes Shiroodi and S-90-5 were more profitable than others under both drought stress and non-drought stress conditions. These genotypes could also be used as parents caring desirable genes in the crossing programs and selection of tolerate genotypes.
Sahar Dashchi, Hassan Rahnama, Kianoosh Cheghamirza, Katayun Zamani,
Volume 7, Issue 2 (3-2021)
Abstract
In oilseed crops, a number of genes involved in the production of triacylglycerol have been identified that changes in their expression have increase the seed oil content. WRI1 and LPAAT are key genes in this synthetic pathway that their overexpression can increase the oil content. In this study, the expression vectors carrying WRI1 and LPAAT genes were designed and constructed for genetic transformation of tobacco (Nicotiana tabaccum) plants. The synthetic WRI1 and LPAAT genes were isolated from the PGH.WRI1 and PGH.LPAAT cloning vector using specific restriction enzymes and then cloned in the PGH.O3.2.2 intermediate vector under the control of SBP and Napin promoters and E9 terminator. Finally, the genetic cassettes were transferred to the plant transformation pBin19 binary vector. The resulting constructs were transferred to Agrobacterium tumefacience strain EHA105 and were used for genetic transformation of tobacco plants. Molecular analysis of transgenic plants confirmed the presence and activity of WRI1 and LPAAT genes. Seeds from transgenic plants were selected on the medium containing kanamycin and developed strong and healthy seedlings.
Reza Amiri, Sohbat Bahraminejad, Kianoosh Cheghamirza,
Volume 8, Issue 1 (8-2021)
Abstract
The study of the genetic structure controlling agronomic traits is one of the preconditions for selecting the appropriate breeding method. In order to analyze genetic of some agronomic traits of bread wheat using generation mean analysis, parents and different generations resulting from the cross of Marvdasht × MV-17 wheat cultivars were assessed in a randomized complete block design with three replicates under normal and terminal drought stress conditions in Research Farm of Razi University (Iran) during 2015-2016 cropping season. Based on the results of weighted ANOVA, a significant difference was observed between different generations for most of the studied traits under both conditions. Generations mean analysis revealed that in addition to the additive and dominance gene effects, a variety of epistatic effects also played a role in the inheritance of most traits, and therefore cannot hope for the success of selection in first generations. The role of additive gene effect was greater than the dominance one for plant height, peduncle length and awn length, indicating usefulness of using recurrent selection to aggregate these genes followed by selecting lines with favorable agronomic characteristics. The model of genetic control for most of the traits was similar under both conditions in terms of the presence or absence of non-allelic interactions and it has not been widely affected by drought stress. The broad-sense heritability for plant height, peduncle length and awn length was estimated to be high under both conditions. The broad-sense heritability for kernel yield was moderate estimated under both conditions, but the narrow-sense heritability was very low. In general, considering the greater role of the non-additive gene effect for most of the traits, the selection is suggested in advanced generations and after access to a high level of gene fixation.
Esmaeil Dasturani, Khalil Zaynali Nezhad, Masood Soltani Najafabadi, Mohammadhadi Pahlevani, Hassan Soltanlo, Saeed Bagherikia,
Volume 8, Issue 1 (8-2021)
Abstract
The aim of this study was to determine the haplotype groups and identify the specific alleles associated with desirable agronomic characteristics in bread wheat. For this purpose, 42 local bread wheat genotypes belong to Iran region and nine commercial cultivars along with Chinese Spring variety (reference genotype) were cultivated in the format of augmented design and evaluated based on their 13 phenotypic traits. The results of descriptive statistics showed that awn length and day to flowering had the highest and lowest phenotypic coefficient of variation, respectively. Eight microsatellite markers were used to investigate the haplotype variation of QTLs associated with phenotypic traits located on wheat chromosomes 4B and 7D. The result showed that the genotypes were classified into 13 and 6 haplotype groups according to the allelic comparison with the reference genotype on chromosome 4B and 7D, respectively. In order to investigate the relationship between traits and markers, analysis of variance was performed based on completely randomized design with unequal numbers of replications for each marker. In general, of the 13 traits studied, there was a statistically significant linkage for eight traits and for the three traits, an allele-specific was introduced simultaneously. If the breeders are interested in genotype selection that simultaneously have three desirable characteristics such as early anthesis, semi-dwarfing and a greater number of grains per spike, they can use an allele-specific (153 bp) of Xgwm149-4B marker.
Amir Gholizadeh, Hassan Amiri Oghan, Valiollah Rameeh, Kamal Payghamzadeh, Behnam Bakhshi, Bahram Alizadeh, Seyed Alireza Dalili, Shahriar Kia, Farnaz Shariati,
Volume 9, Issue 1 (9-2022)
Abstract
Genetic diversity is key to breeding programs and increasing selection efficiency. In this study, 19 promising advanced lines (F7 generation) along with two cultivars, Dalgan and, RGS003 were evaluated in a randomized complete block design with three replications in three experimental field stations (Gorgan, Sari and, Zabol) during the 2020–2021 growing season. The highest phenotypic and genotypic coefficient of variations was found for number of lateral branches and number of pods per plant, respectively. The highest broad sense heritability was estimated for days to end of flowering, and days to start of flowering and the lowest broad sense heritability was estimated for the plant height. The genotypes G16, G18, G15, G1, G2, G5, and G20 with a higher SIIG values as well as a higher seed yield above average were introduced as superior genotypes with respect to yield and other agronomic traits. Therefore, these genotypes can be used for further testing, including adaptation tests. Also, the results of factor analysis and genetic correlation coefficients indicated a positive relationship between number of lateral branches, number of pods per plant and number of seeds per pod with seed yield and seed yield. Generally, it can be concluded that number of lateral branches, number of pods per plant and number of seeds per pod traits could be used as the appropriate criteria to select for increasing seed yield in rapeseed breeding programs.
Alireza Asghari Mirak, Seyed Siamak Alaviakia, Seyed Abolghasem Mohammadi,
Volume 9, Issue 1 (9-2022)
Abstract
Henbane has a high medicinal value due to the presence of hyoscyamine and scopolamine alkaloids. Improving the quality and quantity of henbane alkaloids using modern breeding methods requires evaluating the genetic diversity. The genetic diversity of henbane has been investigated using morphological, biochemical and molecular markers in several studies and the superiority of molecular markers over other markers has been proven. To this end, in 2018, the genetic diversity of 96 henbane genotypes collected from the habitats of northwest Iran was investigated using IRAP and REMAP molecular markers. For IRAP markers, out of 36 possible combinations obtained from eight LTR primers, seven combinations had a fine and scalable amplification. In the REMAP technique, the combination of 11 ISSR primers with eight LTR primers was used, and 12 combinations could be scored out of 88 possible combinations. The average amount of polymorphic information for IRAP and REMAP markers was 0.30 and 0.32, respectively, and the average marker index for these two markers was estimated as 2.59 and 2.47. Based on these criteria, REMAP marker was more efficient than IRAP in estimating the genetic diversity of henbane. In the analysis of molecular variance using IRAP and REMAP markers, intra-population variability was estimated to be higher than inter-population, which indicates the high diversity of these populations in northwestern Iran. Cluster analysis based on IRAP marker failed to separate species and populations, but REMAP marker was able to separate H. pusillus and H. reticulatus species to a high degree. A high shannon index in this research suggests that IRAP and REMAP retrotransposon markers resulted in a high genetic diversity within henbane populations with a high insertion in the genome of henbane populations.
Davood Kiani, Gholamreza Ghodrati, Sadollah Mansouri,
Volume 9, Issue 1 (9-2022)
Abstract
Sesame is an important crop plant for harsh environmental conditions because it is relatively resistance to drought stress. Evaluation of different genotypes in different climate condition plays a fundamental role in selection of the best genotypes before the commercial release of a variety and helping in identify plant traits that should be monitored during breeding experiments. In the present study, 10 promising lines obtained from the preliminary yield test were investigated to evaluate the yield compatibility along with 6 local cultivars in a randomized complete block design experiment with three replications in two cropping years (2018 and 2019) in Dashtestan climate condition in Bushehr province. During the growing season, phenology traits, grain yield components and grain yield were measured. Based on the results of ANOVA, statistically significant difference was observed between different genotypes for plant height, height of the first sub branch, height of the first capsule, number of sub branches, number of capsules per plant, length of capsule, length of capsule bearing zone, number of seeds in capsule and grain yield. Based on the mean comparison and biplot analysis the genotype 12 (Local Dashtestan), 2 (SES97-103), 7 (SES97-110) and 15 (Local Jiroft), were identified as superior genotypes for grain yield. Genotype 5 (SES97-105) and genotypes 14 (SES97-124) with 104.5 days and 4 (Local Darab1) with 111 showed the highest and lowest number of days to maturity, respectively. First capsule height showed the highest positive and significant phenotype (0.56) and genetic (0.78) correlation with grain yield. Days to the end of flowering and days to physiological maturity traits showed a negative genetic correlation with yield. Cluster analysis separated 16 sesame genotypes into four separate groups. Based on regression analysis, the height of the first capsule was identified as the most sensitive trait in predicting the yield of sesame genotypes in Dashtestan region in Bushehr province, which seems it can be considered during breeding programs.
Maryam Ghorbani, Kianoosh Cheghamirza, Saeed Abbasi, Zahra Aziziaram,
Volume 10, Issue 1 (9-2023)
Abstract
The current research was carried out to evaluate genetic diversity of 18 common bean cultivars and promising lines and to determine SSR and SCoT informative markers associated with 14 seed characteristics including the number of seeds per pod, 100 seed weight, seed length, seed width, the contents of crude protein, total soluble sugar, starch content, crude fat, iron, calcium, magnesium, zinc, uronic acid, and mineral ash. The polymorphism information content (PIC) values varied from 0.2 to 0.5 with an average of 0.39 for the SSR markers and from 0.19 to 0.42 with an average of 0.34 for the SCoT markers. The total average resolving power of SSR and SCoT markers were 1.54 and 5.34, respectively, indicating higher efficiency of SCoT markers than SSR markers for the diversity analysis. The common bean studied genotypes were clustered into three distinct groups for both markers based on the Complete Linkage method. Principal coordinate analysis (PCoA) for the SSR markers revealed that the first two principal components justified 59.05% of whole variation. For the SCoT marker, on the other hand, the fraction of variances explained by the first two principal components was equal to 25.43 indicating a better distribution of SCoT markers than SSR markers in the common bean genome. Analysis of molecular variance based on the grouping obtained from cluster analysis showed that the diversity within the group based on SSR and SCoT markers was equal to 89 and 78%, respectively. The results of regression analysis for the studied markers and the bean seed characteristics showed the existence of a significant relationships between a single marker with the several studied traits. This could indicate the association or linkage of the marker locations. Twelve out of 14 of the investigated common bean seed characteristics showed a significant relationship with at least one molecular marker.
Nasrin Akbari, Siamak Alavi Kia, Mostafa Valizadeh,
Volume 10, Issue 2 (2-2024)
Abstract
Due to world population incline and the increasing wheat consumption as human main staple food, as well as high amount of waste of bread which is mainly due to its low quality, the wheat breeding programs to improve bread quality are of great importance. Therefore, evaluating the wheat grains quality and the genetic variation of bread-making quality traits among lines derived from crosses becomes imperative. To this end, the gliadin protein banding pattern of 28 recombinant inbred lines, their corresponding parents and 10 other commercial cultivars were examined via A-PAGE method. The variation between and within the lines and cultivars was determined using AMOVA according to the protein bands. The results of this study revealed high variation for gliadins coding loci with total mean of 73.96%. The percentage of polymorphism was estimated to be 91.67 and 56.25 for lines and commercial cultivars, respectively. The minimum and maximum number of gliadin bands were 12 and 25 bands, respectively. Also, based on PhiPT statistics, the significant difference was observed (P<0.05) between commercial cultivars and recombinant inbred lines in terms of gliadin banding patterns. Cluster analysis and PCoA via banding pattern of gliadins led to formation of three and four distinct groups, respectively. The highest variation was observed in ω-gliadins, suggesting that they may have a role in observed variation among genotypes and their bread making-quality traits.
Behnaz Seifolahpour, Sohbat Bahraminejad, Kianoosh Cheghamirza, Shahryar Sasani,
Volume 11, Issue 1 (9-2024)
Abstract
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